{ "cells": [ { "attachments": {}, "cell_type": "markdown", "metadata": {}, "source": [ "# Import libraries and read data" ] }, { "cell_type": "code", "execution_count": null, "metadata": {}, "outputs": [], "source": [ "import logging\n", "logging.getLogger(\"lightning.pytorch.utilities.rank_zero\").setLevel(logging.WARNING)\n", "logging.getLogger(\"lightning.pytorch.accelerators.cuda\").setLevel(logging.WARNING)\n", "from time import time\n", "from pandas import DataFrame\n", "from sklearn.datasets import load_digits\n", "from sklearn.model_selection import train_test_split\n", "from torch import cuda\n", "from lightning import Trainer\n", "from lightning.pytorch.loggers import CSVLogger\n", "from ideal_init.lightning_model import NNClassifier, merge_logs\n", "\n", "# Define training parameters\n", "BATCH_SIZE = 256\n", "LEARNING_RATE = 1e-1\n", "HIDDEN_SIZES = (10,)\n", "DIRECTORY = \"./\"\n", "EPOCHS = 10\n", "DATASET_NAME = \"Handwritten digits\"\n", "\n", "def experiment_data():\n", " X, y = load_digits(return_X_y=True)\n", " # Split data: 70% train, 10% validation, 20% test\n", " X, X_test, y, y_test = train_test_split(X, y, test_size=0.2)\n", " X_train, X_val, y_train, y_val = train_test_split(X, y, test_size=0.125)\n", " return X_train, y_train, X_val, y_val, X_test, y_test" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "# Run experiments and measure performance" ] }, { "cell_type": "code", "execution_count": null, "metadata": {}, "outputs": [], "source": [ "# keep record of the results of all the iterations\n", "values=[\"IDEAL_acc_before_train\", \"IDEAL_acc_after_train\", \"IDEAL_init_time\", \"IDEAL_train_time\", \"He_acc_before_train\", \"He_acc_after_train\", \"He_init_time\", \"He_train_time\"]\n", "results = {value: [] for value in values}\n", "\n", "# repeat experiment multiple times\n", "NUM_EXPERIMENTS = 10\n", "for experiment in range(NUM_EXPERIMENTS):\n", "\n", " print(f\"Running experiment {experiment+1}\")\n", " X_train, y_train, X_val, y_val, X_test, y_test = experiment_data()\n", "\n", " # Create models\n", " init_model = NNClassifier(X_train, y_train, X_val, y_val, X_test, y_test, initialize=True, hidden_sizes=HIDDEN_SIZES, learning_rate=LEARNING_RATE, batch_size=BATCH_SIZE)\n", " no_init_model = NNClassifier(X_train, y_train, X_val, y_val, X_test, y_test, initialize=False, hidden_sizes=HIDDEN_SIZES, learning_rate=LEARNING_RATE, batch_size=BATCH_SIZE)\n", "\n", " # Create trainers\n", " init_trainer = Trainer(default_root_dir=DIRECTORY, accelerator=\"auto\", devices=\"auto\", max_epochs=EPOCHS, logger=CSVLogger(save_dir=DIRECTORY), enable_checkpointing=False, enable_progress_bar=False, enable_model_summary=False, val_check_interval=1, log_every_n_steps=1, limit_val_batches=1, precision=64)\n", " no_init_trainer = Trainer(default_root_dir=DIRECTORY, accelerator=\"auto\", devices=\"auto\", max_epochs=EPOCHS, logger=CSVLogger(save_dir=DIRECTORY), enable_checkpointing=False, enable_progress_bar=False, enable_model_summary=False, val_check_interval=1, log_every_n_steps=1, limit_val_batches=1, precision=64)\n", "\n", " # Test models before training\n", " results[\"IDEAL_acc_before_train\"].append(init_trainer.test(init_model, verbose=False)[0][\"test_metric\"])\n", " results[\"He_acc_before_train\"].append(no_init_trainer.test(no_init_model, verbose=False)[0][\"test_metric\"])\n", "\n", " # Train models and plot training comparison\n", " init_time = time()\n", " init_trainer.validate(init_model)\n", " init_trainer.fit(init_model)\n", " init_time = time() - init_time\n", " init_model_logs = f\"{init_trainer.logger.log_dir}/metrics.csv\"\n", "\n", " no_init_time = time()\n", " no_init_trainer.validate(no_init_model)\n", " no_init_trainer.fit(no_init_model)\n", " no_init_time = time() - no_init_time\n", " no_init_model_logs = f\"{no_init_trainer.logger.log_dir}/metrics.csv\"\n", "\n", " logs = merge_logs(init_model_logs, no_init_model_logs)\n", " logs[\"dataset\"] = DATASET_NAME\n", "\n", " # Test models after training\n", " results[\"IDEAL_acc_after_train\"].append(init_trainer.test(init_model, verbose=False)[0][\"test_metric\"])\n", " results[\"He_acc_after_train\"].append(no_init_trainer.test(no_init_model, verbose=False)[0][\"test_metric\"])\n", "\n", " # Init and train times\n", " results[\"IDEAL_init_time\"].append(init_model.init_time)\n", " results[\"IDEAL_train_time\"].append(init_time)\n", " results[\"He_init_time\"].append(no_init_model.init_time)\n", " results[\"He_train_time\"].append(no_init_time)\n", "\n", " # store logs\n", " with open(\"results.csv\", \"a\", encoding=\"utf8\") as results_file:\n", " logs.to_csv(results_file, header=False, index=False, quoting=1)\n", "\n", " #clear cache\n", " del init_model, no_init_model\n", " del init_trainer, no_init_trainer\n", " del X_train, y_train, X_val, y_val, X_test, y_test\n", " del logs\n", " cuda.empty_cache()\n", "\n", "results = DataFrame(results)\n", "mean = results.mean()\n", "error = results.sem()*1.96\n", "print(\"Mean values:\")\n", "print(mean.astype(str).apply(lambda x: x[:6]))\n", "print(\"Confidence error:\")\n", "print(error.astype(str).apply(lambda x: x[:6]))" ] } ], "metadata": { "availableInstances": [ { "_defaultOrder": 0, "_isFastLaunch": true, "category": "General purpose", "gpuNum": 0, "hideHardwareSpecs": false, "memoryGiB": 4, "name": "ml.t3.medium", "vcpuNum": 2 }, { "_defaultOrder": 1, "_isFastLaunch": false, "category": "General purpose", "gpuNum": 0, "hideHardwareSpecs": false, "memoryGiB": 8, "name": "ml.t3.large", "vcpuNum": 2 }, { "_defaultOrder": 2, "_isFastLaunch": false, "category": "General purpose", "gpuNum": 0, "hideHardwareSpecs": false, "memoryGiB": 16, "name": "ml.t3.xlarge", "vcpuNum": 4 }, { "_defaultOrder": 3, "_isFastLaunch": false, "category": "General purpose", "gpuNum": 0, "hideHardwareSpecs": false, "memoryGiB": 32, "name": "ml.t3.2xlarge", "vcpuNum": 8 }, { "_defaultOrder": 4, "_isFastLaunch": true, "category": "General purpose", "gpuNum": 0, "hideHardwareSpecs": false, "memoryGiB": 8, "name": "ml.m5.large", "vcpuNum": 2 }, { "_defaultOrder": 5, "_isFastLaunch": false, "category": "General purpose", "gpuNum": 0, "hideHardwareSpecs": false, "memoryGiB": 16, "name": "ml.m5.xlarge", "vcpuNum": 4 }, { "_defaultOrder": 6, "_isFastLaunch": false, "category": "General purpose", "gpuNum": 0, "hideHardwareSpecs": false, "memoryGiB": 32, "name": "ml.m5.2xlarge", "vcpuNum": 8 }, { "_defaultOrder": 7, "_isFastLaunch": false, "category": "General purpose", "gpuNum": 0, "hideHardwareSpecs": false, "memoryGiB": 64, "name": "ml.m5.4xlarge", "vcpuNum": 16 }, { "_defaultOrder": 8, "_isFastLaunch": false, "category": "General purpose", "gpuNum": 0, "hideHardwareSpecs": false, "memoryGiB": 128, "name": "ml.m5.8xlarge", "vcpuNum": 32 }, { "_defaultOrder": 9, "_isFastLaunch": false, "category": "General purpose", "gpuNum": 0, "hideHardwareSpecs": false, "memoryGiB": 192, "name": "ml.m5.12xlarge", "vcpuNum": 48 }, { "_defaultOrder": 10, "_isFastLaunch": false, "category": "General purpose", "gpuNum": 0, "hideHardwareSpecs": false, "memoryGiB": 256, "name": "ml.m5.16xlarge", "vcpuNum": 64 }, { "_defaultOrder": 11, "_isFastLaunch": false, "category": "General purpose", "gpuNum": 0, "hideHardwareSpecs": false, "memoryGiB": 384, "name": "ml.m5.24xlarge", "vcpuNum": 96 }, { "_defaultOrder": 12, "_isFastLaunch": false, "category": "General purpose", "gpuNum": 0, "hideHardwareSpecs": false, "memoryGiB": 8, "name": "ml.m5d.large", "vcpuNum": 2 }, { "_defaultOrder": 13, "_isFastLaunch": false, "category": "General purpose", "gpuNum": 0, "hideHardwareSpecs": false, "memoryGiB": 16, "name": "ml.m5d.xlarge", "vcpuNum": 4 }, { "_defaultOrder": 14, "_isFastLaunch": false, "category": "General purpose", "gpuNum": 0, "hideHardwareSpecs": false, "memoryGiB": 32, "name": "ml.m5d.2xlarge", "vcpuNum": 8 }, { "_defaultOrder": 15, "_isFastLaunch": false, "category": "General purpose", "gpuNum": 0, "hideHardwareSpecs": false, "memoryGiB": 64, "name": "ml.m5d.4xlarge", "vcpuNum": 16 }, { "_defaultOrder": 16, "_isFastLaunch": false, "category": "General purpose", "gpuNum": 0, "hideHardwareSpecs": false, "memoryGiB": 128, "name": "ml.m5d.8xlarge", "vcpuNum": 32 }, { "_defaultOrder": 17, "_isFastLaunch": false, "category": "General purpose", "gpuNum": 0, "hideHardwareSpecs": false, "memoryGiB": 192, "name": "ml.m5d.12xlarge", "vcpuNum": 48 }, { "_defaultOrder": 18, "_isFastLaunch": false, "category": "General purpose", "gpuNum": 0, "hideHardwareSpecs": false, "memoryGiB": 256, "name": "ml.m5d.16xlarge", "vcpuNum": 64 }, { "_defaultOrder": 19, "_isFastLaunch": false, "category": "General purpose", "gpuNum": 0, "hideHardwareSpecs": false, "memoryGiB": 384, "name": "ml.m5d.24xlarge", "vcpuNum": 96 }, { "_defaultOrder": 20, "_isFastLaunch": false, "category": "General purpose", "gpuNum": 0, "hideHardwareSpecs": true, "memoryGiB": 0, "name": "ml.geospatial.interactive", "supportedImageNames": [ "sagemaker-geospatial-v1-0" ], "vcpuNum": 0 }, { "_defaultOrder": 21, "_isFastLaunch": true, "category": "Compute optimized", "gpuNum": 0, "hideHardwareSpecs": false, "memoryGiB": 4, "name": "ml.c5.large", "vcpuNum": 2 }, { "_defaultOrder": 22, "_isFastLaunch": false, "category": "Compute optimized", "gpuNum": 0, "hideHardwareSpecs": false, "memoryGiB": 8, "name": "ml.c5.xlarge", "vcpuNum": 4 }, { "_defaultOrder": 23, "_isFastLaunch": false, "category": "Compute optimized", "gpuNum": 0, "hideHardwareSpecs": false, "memoryGiB": 16, "name": "ml.c5.2xlarge", "vcpuNum": 8 }, { "_defaultOrder": 24, "_isFastLaunch": false, "category": "Compute optimized", "gpuNum": 0, "hideHardwareSpecs": false, "memoryGiB": 32, "name": "ml.c5.4xlarge", "vcpuNum": 16 }, { "_defaultOrder": 25, "_isFastLaunch": false, "category": "Compute optimized", "gpuNum": 0, "hideHardwareSpecs": false, "memoryGiB": 72, "name": "ml.c5.9xlarge", "vcpuNum": 36 }, { "_defaultOrder": 26, "_isFastLaunch": false, "category": "Compute optimized", "gpuNum": 0, "hideHardwareSpecs": false, "memoryGiB": 96, "name": "ml.c5.12xlarge", "vcpuNum": 48 }, { "_defaultOrder": 27, "_isFastLaunch": false, "category": "Compute optimized", "gpuNum": 0, "hideHardwareSpecs": false, "memoryGiB": 144, "name": "ml.c5.18xlarge", "vcpuNum": 72 }, { "_defaultOrder": 28, "_isFastLaunch": false, "category": "Compute optimized", "gpuNum": 0, "hideHardwareSpecs": false, "memoryGiB": 192, "name": "ml.c5.24xlarge", "vcpuNum": 96 }, { "_defaultOrder": 29, "_isFastLaunch": true, "category": "Accelerated computing", "gpuNum": 1, "hideHardwareSpecs": false, "memoryGiB": 16, "name": "ml.g4dn.xlarge", "vcpuNum": 4 }, { "_defaultOrder": 30, "_isFastLaunch": false, "category": "Accelerated computing", "gpuNum": 1, "hideHardwareSpecs": false, "memoryGiB": 32, "name": "ml.g4dn.2xlarge", "vcpuNum": 8 }, { "_defaultOrder": 31, "_isFastLaunch": false, "category": "Accelerated computing", "gpuNum": 1, "hideHardwareSpecs": false, "memoryGiB": 64, "name": "ml.g4dn.4xlarge", "vcpuNum": 16 }, { "_defaultOrder": 32, "_isFastLaunch": false, "category": "Accelerated computing", "gpuNum": 1, "hideHardwareSpecs": false, "memoryGiB": 128, "name": "ml.g4dn.8xlarge", "vcpuNum": 32 }, { "_defaultOrder": 33, "_isFastLaunch": false, "category": "Accelerated computing", "gpuNum": 4, "hideHardwareSpecs": false, "memoryGiB": 192, "name": "ml.g4dn.12xlarge", "vcpuNum": 48 }, { "_defaultOrder": 34, "_isFastLaunch": false, "category": "Accelerated computing", "gpuNum": 1, "hideHardwareSpecs": false, "memoryGiB": 256, "name": "ml.g4dn.16xlarge", "vcpuNum": 64 }, { "_defaultOrder": 35, "_isFastLaunch": false, "category": "Accelerated computing", "gpuNum": 1, "hideHardwareSpecs": false, "memoryGiB": 61, "name": "ml.p3.2xlarge", "vcpuNum": 8 }, { "_defaultOrder": 36, "_isFastLaunch": false, "category": "Accelerated computing", "gpuNum": 4, "hideHardwareSpecs": false, "memoryGiB": 244, "name": "ml.p3.8xlarge", "vcpuNum": 32 }, { "_defaultOrder": 37, "_isFastLaunch": false, "category": "Accelerated computing", "gpuNum": 8, "hideHardwareSpecs": false, "memoryGiB": 488, "name": "ml.p3.16xlarge", "vcpuNum": 64 }, { "_defaultOrder": 38, "_isFastLaunch": false, "category": "Accelerated computing", "gpuNum": 8, "hideHardwareSpecs": false, "memoryGiB": 768, "name": "ml.p3dn.24xlarge", "vcpuNum": 96 }, { "_defaultOrder": 39, "_isFastLaunch": false, "category": "Memory Optimized", "gpuNum": 0, "hideHardwareSpecs": false, "memoryGiB": 16, "name": "ml.r5.large", "vcpuNum": 2 }, { "_defaultOrder": 40, "_isFastLaunch": false, "category": "Memory Optimized", "gpuNum": 0, "hideHardwareSpecs": false, "memoryGiB": 32, "name": "ml.r5.xlarge", "vcpuNum": 4 }, { "_defaultOrder": 41, "_isFastLaunch": false, "category": "Memory Optimized", "gpuNum": 0, "hideHardwareSpecs": false, "memoryGiB": 64, "name": "ml.r5.2xlarge", "vcpuNum": 8 }, { "_defaultOrder": 42, "_isFastLaunch": false, "category": "Memory Optimized", "gpuNum": 0, "hideHardwareSpecs": false, "memoryGiB": 128, "name": "ml.r5.4xlarge", "vcpuNum": 16 }, { "_defaultOrder": 43, "_isFastLaunch": false, "category": "Memory Optimized", "gpuNum": 0, "hideHardwareSpecs": false, "memoryGiB": 256, "name": "ml.r5.8xlarge", "vcpuNum": 32 }, { "_defaultOrder": 44, "_isFastLaunch": false, "category": "Memory Optimized", "gpuNum": 0, "hideHardwareSpecs": false, "memoryGiB": 384, "name": "ml.r5.12xlarge", "vcpuNum": 48 }, { "_defaultOrder": 45, "_isFastLaunch": false, "category": "Memory Optimized", "gpuNum": 0, "hideHardwareSpecs": false, "memoryGiB": 512, "name": "ml.r5.16xlarge", "vcpuNum": 64 }, { "_defaultOrder": 46, "_isFastLaunch": false, "category": "Memory Optimized", "gpuNum": 0, "hideHardwareSpecs": false, "memoryGiB": 768, "name": "ml.r5.24xlarge", "vcpuNum": 96 }, { "_defaultOrder": 47, "_isFastLaunch": false, "category": "Accelerated computing", "gpuNum": 1, "hideHardwareSpecs": false, "memoryGiB": 16, "name": "ml.g5.xlarge", "vcpuNum": 4 }, { "_defaultOrder": 48, "_isFastLaunch": false, "category": "Accelerated computing", "gpuNum": 1, "hideHardwareSpecs": false, "memoryGiB": 32, "name": "ml.g5.2xlarge", "vcpuNum": 8 }, { "_defaultOrder": 49, "_isFastLaunch": false, "category": "Accelerated computing", "gpuNum": 1, "hideHardwareSpecs": false, "memoryGiB": 64, "name": "ml.g5.4xlarge", "vcpuNum": 16 }, { "_defaultOrder": 50, "_isFastLaunch": false, "category": "Accelerated computing", "gpuNum": 1, "hideHardwareSpecs": false, "memoryGiB": 128, "name": "ml.g5.8xlarge", "vcpuNum": 32 }, { "_defaultOrder": 51, "_isFastLaunch": false, "category": "Accelerated computing", "gpuNum": 1, "hideHardwareSpecs": false, "memoryGiB": 256, "name": "ml.g5.16xlarge", "vcpuNum": 64 }, { "_defaultOrder": 52, "_isFastLaunch": false, "category": "Accelerated computing", "gpuNum": 4, "hideHardwareSpecs": false, "memoryGiB": 192, "name": "ml.g5.12xlarge", "vcpuNum": 48 }, { "_defaultOrder": 53, "_isFastLaunch": false, "category": "Accelerated computing", "gpuNum": 4, "hideHardwareSpecs": false, "memoryGiB": 384, "name": "ml.g5.24xlarge", "vcpuNum": 96 }, { "_defaultOrder": 54, "_isFastLaunch": false, "category": "Accelerated computing", "gpuNum": 8, "hideHardwareSpecs": false, "memoryGiB": 768, "name": "ml.g5.48xlarge", "vcpuNum": 192 }, { "_defaultOrder": 55, "_isFastLaunch": false, "category": "Accelerated computing", "gpuNum": 8, "hideHardwareSpecs": false, "memoryGiB": 1152, "name": "ml.p4d.24xlarge", "vcpuNum": 96 }, { "_defaultOrder": 56, "_isFastLaunch": false, "category": "Accelerated computing", "gpuNum": 8, "hideHardwareSpecs": false, "memoryGiB": 1152, "name": "ml.p4de.24xlarge", "vcpuNum": 96 } ], "instance_type": "ml.g4dn.xlarge", "kernelspec": { "display_name": "Python 3", "language": "python", "name": "python3" }, "language_info": { "codemirror_mode": { "name": "ipython", "version": 3 }, "file_extension": ".py", "mimetype": "text/x-python", "name": "python", "nbconvert_exporter": "python", "pygments_lexer": "ipython3", "version": "3.10.10" } }, "nbformat": 4, "nbformat_minor": 4 }